Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Gm27013-202ENSMUST00000205067 1436 ntBASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf2Q8BZT2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Mir669l-201ENSMUST00000103771 98 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm13731-201ENSMUST00000117332 196 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm9429-201ENSMUST00000117804 868 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm11617-201ENSMUST00000119609 639 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm12577-201ENSMUST00000119701 574 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm13532-201ENSMUST00000120373 240 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm12096-201ENSMUST00000121149 829 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm13502-201ENSMUST00000121574 684 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm22214-201ENSMUST00000157563 172 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm24241-201ENSMUST00000157787 145 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm18445-201ENSMUST00000195502 774 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm35570-201ENSMUST00000198730 681 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm42857-201ENSMUST00000200823 339 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm43967-201ENSMUST00000203787 301 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm44128-201ENSMUST00000204909 219 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm18541-201ENSMUST00000215935 538 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC122901.2-201ENSMUST00000216926 285 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm19233-201ENSMUST00000219772 936 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 CT010505.1-201ENSMUST00000227026 396 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Clec2j-201ENSMUST00000032517 515 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Gm6300-201ENSMUST00000192393 1498 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sh3rf2Q8BZT2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm4910-201ENSMUST00000119605 366 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Scarna6-201ENSMUST00000158656 265 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm28503-201ENSMUST00000185966 147 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm18553-201ENSMUST00000194152 634 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm42776-201ENSMUST00000198031 406 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm42581-201ENSMUST00000201774 966 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm45700-201ENSMUST00000205866 347 ntBASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf2Q8BZT2 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms