Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Usp54Q8BL06 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp54Q8BL06 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm8599-201ENSMUST00000193033 457 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm10988-201ENSMUST00000209150 1088 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm19921-201ENSMUST00000210505 703 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Robo2-210ENSMUST00000226478 8059 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 AC126439.1-201ENSMUST00000226772 2104 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 AC154283.1-201ENSMUST00000228417 389 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm24166-201ENSMUST00000082724 135 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm43283-201ENSMUST00000199138 2548 ntBASIC7.24□□□□□ -1.25
Usp54Q8BL06 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm37767-201ENSMUST00000193239 1834 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm23906-201ENSMUST00000157573 128 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm23069-201ENSMUST00000158240 311 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Mir412-201ENSMUST00000083636 80 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm43843-201ENSMUST00000202396 1587 ntBASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp54Q8BL06 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm6503-201ENSMUST00000210829 2225 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm14172-201ENSMUST00000118255 644 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm12231-201ENSMUST00000119447 695 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm6647-201ENSMUST00000170514 641 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Mir1957b-201ENSMUST00000184608 123 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm2099-202ENSMUST00000223310 3341 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp54Q8BL06 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm37916-201ENSMUST00000192153 2435 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Gm45129-201ENSMUST00000208444 2224 ntBASIC7.22□□□□□ -1.25
Usp54Q8BL06 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp54Q8BL06 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Gm11914-201ENSMUST00000117094 507 ntBASIC7.21□□□□□ -1.25
Usp54Q8BL06 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Usp54Q8BL06 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Usp54Q8BL06 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.21□□□□□ -1.26
Usp54Q8BL06 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Usp54Q8BL06 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Usp54Q8BL06 Gm14909-201ENSMUST00000117853 351 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 n-R5s21-201ENSMUST00000122692 117 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm37719-201ENSMUST00000194615 292 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 CT573086.3-201ENSMUST00000228762 594 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm6863-201ENSMUST00000052882 636 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm26330-201ENSMUST00000082817 104 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm42843-201ENSMUST00000196328 3616 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 AC123705.3-201ENSMUST00000223531 2069 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.2□□□□□ -1.26
Usp54Q8BL06 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Usp54Q8BL06 Gm14878-201ENSMUST00000118167 293 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms