Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm22953-201ENSMUST00000116724 101 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm14788-201ENSMUST00000119457 375 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm6461-201ENSMUST00000120015 633 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm4660-201ENSMUST00000131499 403 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm24343-201ENSMUST00000158708 111 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm23774-201ENSMUST00000158990 131 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm16139-201ENSMUST00000160015 420 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm19086-201ENSMUST00000190772 665 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm37030-201ENSMUST00000194254 295 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm37659-201ENSMUST00000194574 111 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm9317-201ENSMUST00000197055 862 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm43444-201ENSMUST00000198123 291 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Mir219c-201ENSMUST00000199860 60 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm42666-201ENSMUST00000201954 152 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm43456-201ENSMUST00000202519 457 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm22807-201ENSMUST00000082737 129 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm12638-201ENSMUST00000119531 298 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm14725-201ENSMUST00000120324 828 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm12110-201ENSMUST00000121601 579 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm20519-201ENSMUST00000173684 359 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm8941-201ENSMUST00000181451 899 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm8993-201ENSMUST00000182182 983 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm5946-201ENSMUST00000182340 970 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm27754-201ENSMUST00000183340 126 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm27887-201ENSMUST00000184367 102 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Mir6412-201ENSMUST00000184477 97 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm38097-201ENSMUST00000192936 439 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Mir6516-201ENSMUST00000196236 110 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm18996-201ENSMUST00000214851 755 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc40Q8BI79 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms