Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm12988-201ENSMUST00000119054 478 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm22343-201ENSMUST00000122648 286 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm16589-201ENSMUST00000159522 918 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm15796-201ENSMUST00000162135 204 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm9134-201ENSMUST00000193186 551 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm12231-201ENSMUST00000119447 695 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm5353-201ENSMUST00000139800 793 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm24685-201ENSMUST00000157764 285 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm23925-202ENSMUST00000188429 132 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm6051-201ENSMUST00000201529 352 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.97□□□□□ -1.45
Nup98Q6PFD9 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Nup98Q6PFD9 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.45
Nup98Q6PFD9 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nup98Q6PFD9 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Nup98Q6PFD9 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.96□□□□□ -1.45
Nup98Q6PFD9 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Nup98Q6PFD9 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm12717-201ENSMUST00000118427 983 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm3816-201ENSMUST00000209803 433 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm46369-201ENSMUST00000221577 401 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Snora52-201ENSMUST00000082732 137 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup98Q6PFD9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm11633-201ENSMUST00000118176 444 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm24931-201ENSMUST00000158324 107 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm16107-201ENSMUST00000162523 862 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm24031-201ENSMUST00000083930 131 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Malat1-201ENSMUST00000172812 6983 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm23594-201ENSMUST00000104307 134 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm22020-201ENSMUST00000104358 136 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm23608-201ENSMUST00000104545 128 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm12328-201ENSMUST00000118611 197 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm6366-201ENSMUST00000198766 826 ntBASIC5.95□□□□□ -1.46
Nup98Q6PFD9 Gm43968-201ENSMUST00000203388 389 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms