Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm24621-201ENSMUST00000082679 140 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22351-201ENSMUST00000083925 107 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Mir674-201ENSMUST00000102421 100 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11271-201ENSMUST00000116054 440 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14772-201ENSMUST00000116562 514 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12102-201ENSMUST00000118251 604 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11533-201ENSMUST00000120287 477 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14574-201ENSMUST00000120644 279 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11341-201ENSMUST00000122316 447 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22434-201ENSMUST00000158549 122 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm26024-201ENSMUST00000158657 322 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11107-201ENSMUST00000165414 505 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm28008-201ENSMUST00000184021 186 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3454-201ENSMUST00000185571 412 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm29216-201ENSMUST00000187117 492 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm19739-201ENSMUST00000195941 153 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm9245-201ENSMUST00000200528 983 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm5055-201ENSMUST00000215697 581 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms