Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm14606-201ENSMUST00000117078 1155 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm11833-201ENSMUST00000118393 853 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm16147-201ENSMUST00000162143 373 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC8.27□□□□□ -1.09
Col17a1Q07563 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 AC159297.2-201ENSMUST00000219567 1075 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm6988-201ENSMUST00000222676 375 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm38026-201ENSMUST00000193284 3880 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm38096-201ENSMUST00000193692 2389 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm44829-201ENSMUST00000208008 3193 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col17a1Q07563 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC8.27□□□□□ -1.09
Col17a1Q07563 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm42975-201ENSMUST00000200612 1491 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm15603-201ENSMUST00000119252 492 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm13932-201ENSMUST00000120873 610 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm14212-201ENSMUST00000122023 826 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Mir713-201ENSMUST00000178651 108 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Mir7685-201ENSMUST00000183555 62 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC8.26□□□□□ -1.09
Col17a1Q07563 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 AC163664.1-201ENSMUST00000226251 1248 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm14895-201ENSMUST00000121858 1361 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm12788-201ENSMUST00000119090 308 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm12994-201ENSMUST00000119601 447 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm12897-201ENSMUST00000120341 250 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm27861-201ENSMUST00000183920 214 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm21139-201ENSMUST00000186594 877 ntBASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Col17a1Q07563 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms