Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Gabpb1Q00420 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Gabpb1Q00420 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Gabpb1Q00420 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Gabpb1Q00420 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Gabpb1Q00420 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Mir466i-201ENSMUST00000116924 121 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm15428-201ENSMUST00000121352 333 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm24216-201ENSMUST00000158259 117 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm23115-201ENSMUST00000158480 108 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm23633-201ENSMUST00000175293 119 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Mir6539-201ENSMUST00000183732 110 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm37492-201ENSMUST00000191948 376 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm44431-201ENSMUST00000203500 413 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm43945-201ENSMUST00000203595 754 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm17999-201ENSMUST00000211568 542 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm19885-201ENSMUST00000212853 343 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Gabpb1Q00420 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm14836-201ENSMUST00000118567 471 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm12901-201ENSMUST00000118690 532 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm11677-201ENSMUST00000121349 977 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm13214-201ENSMUST00000122137 408 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Mir1970-201ENSMUST00000157839 104 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm24940-201ENSMUST00000158326 108 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm22326-201ENSMUST00000158897 351 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm25348-201ENSMUST00000158961 111 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm27266-201ENSMUST00000184521 123 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm19891-201ENSMUST00000189771 303 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm37681-201ENSMUST00000193880 727 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Gabpb1Q00420 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.34□□□□□ -1.55
Gabpb1Q00420 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.34□□□□□ -1.56
Gabpb1Q00420 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Gabpb1Q00420 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Gabpb1Q00420 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms