Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm24160-201ENSMUST00000104594 126 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm15670-201ENSMUST00000117740 447 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm17014-201ENSMUST00000120765 168 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm16345-201ENSMUST00000146065 158 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm24186-201ENSMUST00000157983 127 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm8941-201ENSMUST00000181451 899 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm27551-201ENSMUST00000184258 77 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm37445-201ENSMUST00000195318 242 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm45722-201ENSMUST00000213075 466 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm2099-201ENSMUST00000220979 412 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.57□□□□□ -1.68
Nkx3-1P97436 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nkx3-1P97436 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm25418-201ENSMUST00000104214 129 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm14485-201ENSMUST00000119489 493 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm9038-201ENSMUST00000203400 604 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm23626-201ENSMUST00000082458 133 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.56□□□□□ -1.68
Nkx3-1P97436 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nkx3-1P97436 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nkx3-1P97436 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms