Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Rfx1P48377 Gm43092-201ENSMUST00000202986 1854 ntBASIC7.38□□□□□ -1.23
Rfx1P48377 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.38□□□□□ -1.23
Rfx1P48377 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC7.38□□□□□ -1.23
Rfx1P48377 Gm43990-201ENSMUST00000203790 1691 ntBASIC7.38□□□□□ -1.23
Rfx1P48377 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Rfx1P48377 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm3665-201ENSMUST00000177214 2461 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm7451-201ENSMUST00000208382 1392 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 AC154755.2-201ENSMUST00000224384 2857 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Robo2-210ENSMUST00000226478 8059 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm25848-201ENSMUST00000116790 144 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm15901-201ENSMUST00000117663 941 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm12174-201ENSMUST00000119853 813 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm12358-201ENSMUST00000121842 520 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm6568-201ENSMUST00000122274 697 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm23756-201ENSMUST00000157582 114 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC7.37□□□□□ -1.23
Rfx1P48377 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm9671-201ENSMUST00000171502 547 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Mir5617-201ENSMUST00000176786 57 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm23269-201ENSMUST00000178701 107 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm5974-201ENSMUST00000181607 986 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Mir7033-201ENSMUST00000184259 81 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm27804-201ENSMUST00000185135 119 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm8367-201ENSMUST00000186145 887 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm37837-201ENSMUST00000191743 604 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC7.37□□□□□ -1.23
Rfx1P48377 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm18586-201ENSMUST00000217265 518 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 AC152951.1-201ENSMUST00000218907 266 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.37□□□□□ -1.23
Rfx1P48377 AC156560.1-201ENSMUST00000221425 256 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 AC159256.1-201ENSMUST00000224298 1039 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 AC117202.1-201ENSMUST00000227007 445 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Rfx1P48377 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 AC137871.4-201ENSMUST00000226323 3901 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Rfx1P48377 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.37□□□□□ -1.23
Rfx1P48377 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Rfx1P48377 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm36927-201ENSMUST00000192504 1841 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm43485-201ENSMUST00000199292 1710 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Rfx1P48377 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm13193-201ENSMUST00000117275 225 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm15016-201ENSMUST00000117300 720 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm14163-201ENSMUST00000117342 217 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm16463-201ENSMUST00000120527 721 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm12006-201ENSMUST00000120786 403 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm25281-201ENSMUST00000157270 104 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm17177-201ENSMUST00000169144 483 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC7.36□□□□□ -1.23
Rfx1P48377 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm16531-201ENSMUST00000180658 967 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm1972-201ENSMUST00000181606 964 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm27853-201ENSMUST00000184176 250 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms