Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.89□□□□□ -1.31
Sox18P43680 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.89□□□□□ -1.31
Sox18P43680 Gm17841-201ENSMUST00000210711 2425 ntBASIC6.89□□□□□ -1.31
Sox18P43680 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox18P43680 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox18P43680 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox18P43680 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox18P43680 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox18P43680 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Sox18P43680 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox18P43680 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox18P43680 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.88□□□□□ -1.31
Sox18P43680 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox18P43680 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
Sox18P43680 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm14756-201ENSMUST00000116395 240 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm12787-201ENSMUST00000119234 396 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm12543-201ENSMUST00000120410 543 ntBASIC6.88□□□□□ -1.31
Sox18P43680 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm2020-201ENSMUST00000145242 579 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm25395-201ENSMUST00000157343 272 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm22085-201ENSMUST00000158344 110 ntBASIC6.88□□□□□ -1.31
Sox18P43680 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm24103-201ENSMUST00000174930 77 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm23187-201ENSMUST00000175746 86 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm27676-201ENSMUST00000183669 61 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm27653-201ENSMUST00000185037 136 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm17956-201ENSMUST00000199931 838 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm44265-201ENSMUST00000203631 465 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm44411-201ENSMUST00000204172 349 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm44604-201ENSMUST00000205475 496 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm45185-201ENSMUST00000207556 404 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 AC160863.1-201ENSMUST00000218412 317 ntBASIC6.88□□□□□ -1.31
Sox18P43680 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox18P43680 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 AC158605.4-201ENSMUST00000219013 3361 ntBASIC6.88□□□□□ -1.31
Sox18P43680 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.88□□□□□ -1.31
Sox18P43680 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox18P43680 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox18P43680 Gm43718-201ENSMUST00000197524 1857 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms