Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx2P43241 Gm15297-201ENSMUST00000117795 290 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm13491-201ENSMUST00000118267 235 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm14352-201ENSMUST00000119250 449 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm13367-201ENSMUST00000119955 796 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm11679-201ENSMUST00000121830 779 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Mir1947-201ENSMUST00000158235 85 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx2P43241 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm36986-201ENSMUST00000195320 353 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm18150-201ENSMUST00000195341 645 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm2623-201ENSMUST00000199229 286 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm18100-201ENSMUST00000200897 452 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm32453-201ENSMUST00000204183 456 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx2P43241 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Gm9512-201ENSMUST00000223112 497 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx2P43241 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx2P43241 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.01□□□□□ -1.61
Cdx2P43241 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Cdx2P43241 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx2P43241 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx2P43241 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx2P43241 Gm38062-201ENSMUST00000192541 1856 ntBASIC5□□□□□ -1.61
Cdx2P43241 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdx2P43241 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Mir546-201ENSMUST00000102105 121 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm11911-201ENSMUST00000117938 1023 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm12328-201ENSMUST00000118611 197 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm12988-201ENSMUST00000119054 478 ntBASIC5□□□□□ -1.61
Cdx2P43241 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5□□□□□ -1.61
Cdx2P43241 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Gm24188-201ENSMUST00000157980 108 ntBASIC5□□□□□ -1.61
Cdx2P43241 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5□□□□□ -1.61
Cdx2P43241 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm21909-201ENSMUST00000178260 439 ntBASIC5□□□□□ -1.61
Cdx2P43241 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm29332-201ENSMUST00000190829 227 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm18864-201ENSMUST00000194518 1051 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm43018-201ENSMUST00000198075 1275 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm5288-201ENSMUST00000198323 1119 ntBASIC5□□□□□ -1.61
Cdx2P43241 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5□□□□□ -1.61
Cdx2P43241 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Gm6906-201ENSMUST00000218014 569 ntBASIC5□□□□□ -1.61
Cdx2P43241 AC158803.3-201ENSMUST00000220024 211 ntBASIC5□□□□□ -1.61
Cdx2P43241 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5□□□□□ -1.61
Cdx2P43241 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdx2P43241 Gm22220-201ENSMUST00000082671 149 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm22350-201ENSMUST00000083924 156 ntBASIC5□□□□□ -1.61
Cdx2P43241 Gm45819-201ENSMUST00000210940 1751 ntBASIC5□□□□□ -1.61
Cdx2P43241 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Gm43211-201ENSMUST00000196901 1899 ntBASIC5□□□□□ -1.61
Cdx2P43241 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Gm37964-201ENSMUST00000192459 4905 ntBASIC5□□□□□ -1.61
Cdx2P43241 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5□□□□□ -1.61
Cdx2P43241 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5□□□□□ -1.61
Cdx2P43241 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx2P43241 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdx2P43241 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cdx2P43241 Gm23593-201ENSMUST00000104309 120 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm8145-201ENSMUST00000118220 745 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm13363-201ENSMUST00000122008 522 ntBASIC4.99□□□□□ -1.61
Cdx2P43241 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx2P43241 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms