Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.85□□□□□ -1.47
Col2a1P28481 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col2a1P28481 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col2a1P28481 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Col2a1P28481 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.84□□□□□ -1.47
Col2a1P28481 Gm25103-201ENSMUST00000122671 318 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Gm25861-201ENSMUST00000158251 109 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Gm16125-201ENSMUST00000159003 339 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.84□□□□□ -1.47
Col2a1P28481 Gm18177-201ENSMUST00000188373 404 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Gm21735-201ENSMUST00000190360 696 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Gm38360-201ENSMUST00000195130 454 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.84□□□□□ -1.47
Col2a1P28481 Gm18791-201ENSMUST00000204611 726 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.84□□□□□ -1.47
Col2a1P28481 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.84□□□□□ -1.47
Col2a1P28481 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col2a1P28481 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col2a1P28481 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col2a1P28481 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col2a1P28481 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col2a1P28481 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col2a1P28481 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col2a1P28481 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.84□□□□□ -1.48
Col2a1P28481 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.84□□□□□ -1.48
Col2a1P28481 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm15297-201ENSMUST00000117795 290 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm8214-201ENSMUST00000172123 351 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm28097-201ENSMUST00000187333 366 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm9687-201ENSMUST00000189312 602 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm37492-201ENSMUST00000191948 376 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm11360-201ENSMUST00000221898 262 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Col2a1P28481 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Zfp389-201ENSMUST00000118425 675 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Gm13149-201ENSMUST00000122071 339 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm25605-201ENSMUST00000158364 124 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col2a1P28481 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm22826-201ENSMUST00000083774 165 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Col2a1P28481 Gm10540-201ENSMUST00000097581 276 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Smc5-206ENSMUST00000226111 3265 ntBASIC5.83□□□□□ -1.48
Col2a1P28481 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col2a1P28481 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col2a1P28481 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.82□□□□□ -1.48
Col2a1P28481 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms