Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Sdc1P18828 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm14575-201ENSMUST00000117210 560 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm15765-201ENSMUST00000118407 910 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm14082-201ENSMUST00000118582 801 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm11196-201ENSMUST00000119052 395 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm17091-201ENSMUST00000163248 357 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm27688-201ENSMUST00000183634 91 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Sdc1P18828 Mir6908-201ENSMUST00000184056 63 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm29148-201ENSMUST00000188140 336 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm19029-201ENSMUST00000189923 564 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm18009-201ENSMUST00000203239 1016 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm43946-201ENSMUST00000204058 886 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm44147-201ENSMUST00000204658 94 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm44163-201ENSMUST00000205140 475 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm44279-201ENSMUST00000205154 472 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm44817-201ENSMUST00000205416 453 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm18226-201ENSMUST00000215261 521 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC4.2□□□□□ -1.74
Sdc1P18828 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sdc1P18828 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm29486-201ENSMUST00000088648 372 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.2□□□□□ -1.74
Sdc1P18828 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 AC132465.1-201ENSMUST00000219938 1307 ntBASIC4.2□□□□□ -1.74
Sdc1P18828 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sdc1P18828 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Sdc1P18828 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Sdc1P18828 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm25344-201ENSMUST00000104503 132 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm12653-201ENSMUST00000117778 561 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm14885-201ENSMUST00000117969 496 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm14580-201ENSMUST00000119122 718 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm13735-201ENSMUST00000120217 670 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm26352-201ENSMUST00000158223 125 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm23050-201ENSMUST00000158775 165 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sdc1P18828 Gm15256-201ENSMUST00000177793 883 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm26057-201ENSMUST00000178099 165 ntBASIC4.19□□□□□ -1.74
Sdc1P18828 Gm2058-201ENSMUST00000178791 560 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms