Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm29163-201ENSMUST00000188029 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm21524-201ENSMUST00000190499 696 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm19777-201ENSMUST00000191940 358 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm38221-201ENSMUST00000195146 365 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm43546-201ENSMUST00000196721 943 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm42958-201ENSMUST00000197595 318 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm43576-201ENSMUST00000197937 871 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm42713-201ENSMUST00000202709 945 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm44411-201ENSMUST00000204172 349 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm45136-201ENSMUST00000205793 943 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm6436-201ENSMUST00000077163 451 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm24144-201ENSMUST00000082632 111 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm23815-201ENSMUST00000083231 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Mir106b-201ENSMUST00000083580 82 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm23520-201ENSMUST00000093736 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdh1F7BJK1 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm22256-201ENSMUST00000102291 107 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm24888-201ENSMUST00000104387 130 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm8855-201ENSMUST00000118888 878 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm4234-201ENSMUST00000119747 714 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm7571-201ENSMUST00000120252 927 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm14998-201ENSMUST00000120502 495 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Defa-ps13-201ENSMUST00000120695 204 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm6808-201ENSMUST00000162341 807 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm8715-201ENSMUST00000162728 531 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm3111-201ENSMUST00000167426 490 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm3242-201ENSMUST00000171273 485 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm27006-201ENSMUST00000182218 943 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm27539-201ENSMUST00000184971 224 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm29383-201ENSMUST00000188284 480 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm38329-201ENSMUST00000193473 427 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm7804-202ENSMUST00000194187 854 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm43396-201ENSMUST00000197506 706 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm43368-201ENSMUST00000200638 409 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm43224-201ENSMUST00000201567 898 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm4874-201ENSMUST00000203589 691 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm6009-201ENSMUST00000210848 280 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 Gm18225-201ENSMUST00000216708 742 ntBASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.64□□□□□ -1.51
Pcdh1F7BJK1 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms