Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm13681-201ENSMUST00000117925 210 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm13755-201ENSMUST00000118509 305 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm11481-201ENSMUST00000120069 255 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm14620-201ENSMUST00000120656 383 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm13533-201ENSMUST00000121104 177 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm11761-201ENSMUST00000121392 445 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm24477-201ENSMUST00000157438 103 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm2959-201ENSMUST00000169844 621 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm26970-201ENSMUST00000182990 964 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm28859-201ENSMUST00000186650 616 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm29284-201ENSMUST00000188363 255 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm29201-201ENSMUST00000189120 431 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm44277-201ENSMUST00000205128 649 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Gm6056-201ENSMUST00000221253 488 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.63□□□□□ -1.51
Vps28Q9D1C8 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm11679-201ENSMUST00000121830 779 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm23250-201ENSMUST00000157444 267 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm22596-201ENSMUST00000157601 316 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm22916-201ENSMUST00000157616 119 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm24940-201ENSMUST00000158326 108 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm22411-201ENSMUST00000175462 126 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm22002-201ENSMUST00000175622 125 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm27754-201ENSMUST00000183340 126 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Mir6417-201ENSMUST00000183815 116 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm20770-201ENSMUST00000193474 694 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm37319-201ENSMUST00000193500 636 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm37719-201ENSMUST00000194615 292 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm44403-201ENSMUST00000198554 129 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm45689-201ENSMUST00000210522 133 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm45870-201ENSMUST00000211269 601 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm18587-201ENSMUST00000213736 841 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 AC154184.2-201ENSMUST00000225335 349 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm10794-201ENSMUST00000099624 207 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Vps28Q9D1C8 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms