Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm25891-201ENSMUST00000180050 132 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm27236-201ENSMUST00000184147 442 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Mir6911-201ENSMUST00000184241 69 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm28788-201ENSMUST00000189717 375 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm29558-201ENSMUST00000190134 375 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm38097-201ENSMUST00000192936 439 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm37550-201ENSMUST00000193230 463 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm38291-201ENSMUST00000193671 259 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm9236-201ENSMUST00000196892 587 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm18691-201ENSMUST00000203593 872 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ndc1Q8VCB1 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ndc1Q8VCB1 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm12814-201ENSMUST00000117091 846 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm14365-201ENSMUST00000117535 587 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm22390-201ENSMUST00000157588 325 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm22518-201ENSMUST00000158267 68 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Mir6361-201ENSMUST00000185079 101 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm28594-201ENSMUST00000187022 661 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm28191-201ENSMUST00000189112 211 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm44431-201ENSMUST00000203500 413 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm44225-201ENSMUST00000203582 186 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm44239-201ENSMUST00000204228 271 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm5321-201ENSMUST00000072050 447 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm8526-201ENSMUST00000079153 475 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Gm24319-201ENSMUST00000083389 107 ntBASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ndc1Q8VCB1 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms