Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm13367-201ENSMUST00000119955 796 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm23430-201ENSMUST00000122490 314 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm23669-201ENSMUST00000157470 128 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm22210-201ENSMUST00000158101 144 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm6047-201ENSMUST00000167221 574 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm29376-201ENSMUST00000189357 835 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm37203-201ENSMUST00000191618 385 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm38011-201ENSMUST00000193312 279 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm43315-201ENSMUST00000198120 313 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm7688-201ENSMUST00000212857 337 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Mir20a-201ENSMUST00000083508 107 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm22155-201ENSMUST00000083836 162 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lsm1Q8VC85 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.04□□□□□ -1.6
Lsm1Q8VC85 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm15772-201ENSMUST00000118533 438 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm14560-201ENSMUST00000118672 375 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm25489-201ENSMUST00000158727 141 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Mir3095-201ENSMUST00000175552 87 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm27024-201ENSMUST00000182561 755 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Mir6989-201ENSMUST00000184812 65 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm2914-201ENSMUST00000186120 328 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm28188-201ENSMUST00000190483 236 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm38015-201ENSMUST00000193048 188 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm18482-201ENSMUST00000202405 760 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Gm2961-201ENSMUST00000211074 772 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Mir298-201ENSMUST00000083476 82 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Mir99a-201ENSMUST00000083596 65 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.03□□□□□ -1.6
Lsm1Q8VC85 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm15185-201ENSMUST00000117397 746 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm18802-201ENSMUST00000186270 888 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm44820-201ENSMUST00000207420 396 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Gm5750-201ENSMUST00000218711 801 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.02□□□□□ -1.61
Lsm1Q8VC85 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms