Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm12717-201ENSMUST00000118427 983 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm13702-201ENSMUST00000118542 825 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm14603-201ENSMUST00000121275 448 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm6027-201ENSMUST00000121467 756 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm25782-201ENSMUST00000122526 289 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm17046-201ENSMUST00000168078 850 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm20778-201ENSMUST00000178524 627 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm28974-201ENSMUST00000187893 231 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm43304-201ENSMUST00000196803 326 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm19253-201ENSMUST00000204279 307 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 LOC665443-201ENSMUST00000212284 796 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc9Q8VC31 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm22952-201ENSMUST00000116720 120 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm15531-201ENSMUST00000118062 252 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm11877-201ENSMUST00000118921 852 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm14331-201ENSMUST00000120396 409 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm11448-201ENSMUST00000120427 450 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm22428-201ENSMUST00000158554 132 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm24081-201ENSMUST00000175177 125 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Mir6244-201ENSMUST00000184156 117 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm29356-201ENSMUST00000186935 373 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm4332-201ENSMUST00000196114 346 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm6543-201ENSMUST00000197353 808 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm43093-201ENSMUST00000202439 1213 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm45269-201ENSMUST00000210359 282 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc9Q8VC31 Gm20541-201ENSMUST00000173035 1406 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 AC115034.1-201ENSMUST00000215393 3846 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 AC156632.1-201ENSMUST00000220626 3845 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Neat1-201ENSMUST00000173672 20771 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Mir706-201ENSMUST00000102262 84 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm24069-201ENSMUST00000104512 127 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm11510-201ENSMUST00000120278 347 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm15719-201ENSMUST00000120619 635 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm15267-201ENSMUST00000120888 464 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm11879-201ENSMUST00000121885 702 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm25219-201ENSMUST00000157545 330 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm6047-201ENSMUST00000167221 574 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm23872-201ENSMUST00000175432 77 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm26983-201ENSMUST00000182051 388 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Mir6418-201ENSMUST00000185075 115 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm28586-201ENSMUST00000189857 456 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm37189-201ENSMUST00000192131 298 ntBASIC6.42□□□□□ -1.38
Ccdc9Q8VC31 Gm44316-201ENSMUST00000199274 97 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms