Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44857-201ENSMUST00000208331 196 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 CT025526.1-201ENSMUST00000217327 267 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm18405-201ENSMUST00000220743 511 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm9237-201ENSMUST00000221499 548 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm5374-202ENSMUST00000222910 314 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Zfp429-203ENSMUST00000224684 524 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm25404-201ENSMUST00000082970 107 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm13114-201ENSMUST00000117605 106 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm15187-201ENSMUST00000122329 264 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm18604-201ENSMUST00000172535 558 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm18128-201ENSMUST00000172625 511 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm20530-201ENSMUST00000174261 254 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm18952-201ENSMUST00000194471 846 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm19032-201ENSMUST00000208584 592 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm17994-201ENSMUST00000209260 533 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm18414-201ENSMUST00000210858 694 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm5229-201ENSMUST00000039375 354 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm5185-201ENSMUST00000080271 619 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm24144-201ENSMUST00000082632 111 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms