Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm2429-201ENSMUST00000194635 586 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22897-202ENSMUST00000197782 127 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44038-201ENSMUST00000203952 889 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm10709-201ENSMUST00000213318 480 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm18541-201ENSMUST00000215935 538 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19174-201ENSMUST00000216944 956 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr192-201ENSMUST00000080251 925 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm6990-201ENSMUST00000086830 348 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm23311-201ENSMUST00000104152 134 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm14938-201ENSMUST00000119482 943 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm12849-201ENSMUST00000120013 739 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm8545-201ENSMUST00000120692 801 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm11852-201ENSMUST00000120806 222 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm15530-201ENSMUST00000122206 555 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22959-201ENSMUST00000122514 303 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm9597-201ENSMUST00000171913 602 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22411-201ENSMUST00000175462 126 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22002-201ENSMUST00000175622 125 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19560-201ENSMUST00000177510 514 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm27030-201ENSMUST00000182551 464 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm27855-201ENSMUST00000184122 128 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm38030-201ENSMUST00000192376 475 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm36994-201ENSMUST00000192941 492 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm37270-201ENSMUST00000194277 330 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44485-201ENSMUST00000199569 137 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm2602-201ENSMUST00000202112 571 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22351-201ENSMUST00000083925 107 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Mir504-201ENSMUST00000093602 79 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Smc5-206ENSMUST00000226111 3265 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc28bQ8CEG5 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc28bQ8CEG5 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms