Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.48□□□□□ -1.37
Vps53Q8CCB4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.48□□□□□ -1.37
Vps53Q8CCB4 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm11561-201ENSMUST00000117429 417 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm12732-201ENSMUST00000121688 180 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm13007-201ENSMUST00000121866 365 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm25227-201ENSMUST00000158204 112 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm17164-201ENSMUST00000169013 506 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm17511-201ENSMUST00000172206 342 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm22420-201ENSMUST00000178795 126 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm28017-201ENSMUST00000183434 126 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm28614-201ENSMUST00000186483 458 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm29640-201ENSMUST00000187972 278 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm42646-201ENSMUST00000202233 914 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Platr25-208ENSMUST00000222602 939 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm7042-201ENSMUST00000223027 384 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 BC023105-201ENSMUST00000073997 1227 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm23102-201ENSMUST00000083724 116 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Vps53Q8CCB4 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Vps53Q8CCB4 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.46□□□□□ -1.37
Vps53Q8CCB4 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Vps53Q8CCB4 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm22895-201ENSMUST00000157508 308 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm25603-201ENSMUST00000158361 105 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm26172-201ENSMUST00000158421 134 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm17142-201ENSMUST00000164933 645 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.46□□□□□ -1.38
Vps53Q8CCB4 Gm5139-201ENSMUST00000175943 249 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms