Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm22479-201ENSMUST00000122566 81 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm22223-201ENSMUST00000157360 125 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm24781-201ENSMUST00000157636 117 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm22951-201ENSMUST00000179471 107 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm28412-201ENSMUST00000187243 177 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm29105-201ENSMUST00000187256 450 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 AC154296.2-201ENSMUST00000214696 545 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm17849-201ENSMUST00000219788 853 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 AC122905.2-201ENSMUST00000220325 269 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm38278-201ENSMUST00000194715 1365 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm26002-201ENSMUST00000101915 107 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm12939-201ENSMUST00000117303 165 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm13176-201ENSMUST00000117910 477 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm13379-201ENSMUST00000118053 621 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm14038-201ENSMUST00000121500 807 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm23031-201ENSMUST00000157998 119 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm20454-201ENSMUST00000172713 221 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm20453-201ENSMUST00000173968 226 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Mir6411-201ENSMUST00000183556 108 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm7870-201ENSMUST00000184467 616 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm37493-201ENSMUST00000193167 433 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm9227-201ENSMUST00000194733 566 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm21006-201ENSMUST00000196930 667 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm5324-201ENSMUST00000208115 476 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm17994-201ENSMUST00000209260 533 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm18781-201ENSMUST00000211252 924 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 CT485612.3-201ENSMUST00000222179 408 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 AC168059.1-201ENSMUST00000225846 841 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm22581-201ENSMUST00000083735 136 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm336-201ENSMUST00000186376 1480 ntBASIC7.4□□□□□ -1.22
Trim47Q8C0E3 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms