Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Igkv12-42-201ENSMUST00000198769 327 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm44203-201ENSMUST00000203134 307 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm36189-201ENSMUST00000204113 523 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm18840-201ENSMUST00000204553 506 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm44565-201ENSMUST00000208194 269 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm44648-201ENSMUST00000208267 329 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 AC153954.2-201ENSMUST00000213811 287 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 CT025665.1-201ENSMUST00000215251 1199 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 CT025603.3-201ENSMUST00000224031 419 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Diaph3-204ENSMUST00000226254 682 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 AC154276.2-201ENSMUST00000227707 309 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm25129-201ENSMUST00000082651 133 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm38362-201ENSMUST00000192999 2064 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Zfp82-203ENSMUST00000182546 1964 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 AC122346.2-201ENSMUST00000224326 2931 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm37110-201ENSMUST00000192993 1628 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm44183-201ENSMUST00000203964 1628 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm25594-201ENSMUST00000102274 82 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Ighv1-67-201ENSMUST00000103538 294 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm12565-201ENSMUST00000119004 649 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm14813-201ENSMUST00000122291 395 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm25767-201ENSMUST00000158572 124 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm23823-201ENSMUST00000158740 124 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm17907-201ENSMUST00000173150 710 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm7734-201ENSMUST00000182832 1011 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm5372-201ENSMUST00000187540 409 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm29651-201ENSMUST00000189088 697 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm20802-201ENSMUST00000190832 698 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm42605-201ENSMUST00000199565 385 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm42828-201ENSMUST00000199669 469 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm43806-201ENSMUST00000201766 469 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm44267-201ENSMUST00000204132 385 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm7482-201ENSMUST00000206446 505 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm9240-201ENSMUST00000206527 742 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 AC155712.1-201ENSMUST00000219704 160 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm4987-201ENSMUST00000078326 408 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim35Q8C006 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim35Q8C006 Gm19113-201ENSMUST00000217552 1828 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 AC153912.2-201ENSMUST00000215840 2015 ntBASIC8.36□□□□□ -1.07
Trim35Q8C006 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm7364-201ENSMUST00000188760 1501 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 AC167420.1-201ENSMUST00000222999 2121 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim35Q8C006 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.35□□□□□ -1.07
Trim35Q8C006 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms