Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Robo2-210ENSMUST00000226478 8059 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm25315-201ENSMUST00000116823 121 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm14512-201ENSMUST00000117924 230 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm14797-201ENSMUST00000119378 1480 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm15803-201ENSMUST00000120118 394 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm11507-201ENSMUST00000156462 412 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm26170-201ENSMUST00000158419 148 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm15812-201ENSMUST00000162331 748 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm6223-201ENSMUST00000178436 871 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm29596-201ENSMUST00000185710 385 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm2914-201ENSMUST00000186120 328 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm37846-201ENSMUST00000191840 3774 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm18036-201ENSMUST00000195256 272 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm17984-201ENSMUST00000205286 859 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm45700-201ENSMUST00000205866 347 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm6362-201ENSMUST00000217686 836 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm18904-201ENSMUST00000218756 329 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm20368-201ENSMUST00000220716 301 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 AC134860.4-201ENSMUST00000223592 978 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 CT030254.3-201ENSMUST00000225959 1231 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm23511-201ENSMUST00000083084 164 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm23686-201ENSMUST00000083241 164 ntBASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Usp40Q8BWR4 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Usp40Q8BWR4 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Usp40Q8BWR4 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Fam35a-206ENSMUST00000228626 3100 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm24340-201ENSMUST00000104208 97 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm12931-201ENSMUST00000117046 324 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm11975-201ENSMUST00000118772 481 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm11483-201ENSMUST00000119839 247 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm14898-201ENSMUST00000120202 645 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm14463-201ENSMUST00000121117 498 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm22916-201ENSMUST00000157616 119 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm16026-202ENSMUST00000159695 772 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Mir3090-201ENSMUST00000175597 87 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm17981-201ENSMUST00000191109 739 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm33952-201ENSMUST00000197795 408 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm42776-201ENSMUST00000198031 406 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm44282-201ENSMUST00000203199 190 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm19039-201ENSMUST00000204363 575 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm8291-201ENSMUST00000209635 1261 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 AC183268.2-201ENSMUST00000214513 446 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 AC130673.2-201ENSMUST00000228091 797 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms