Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ubfd1Q78JW9 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm22499-201ENSMUST00000104501 135 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm14833-201ENSMUST00000118345 1027 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm14913-201ENSMUST00000120011 1093 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm11481-201ENSMUST00000120069 255 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Snora81-201ENSMUST00000157310 178 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Mir1970-201ENSMUST00000157839 104 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Mir1945-201ENSMUST00000157919 78 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm25898-201ENSMUST00000158303 106 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm2966-201ENSMUST00000166052 481 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm17204-201ENSMUST00000167936 478 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm17044-201ENSMUST00000168549 828 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm8032-201ENSMUST00000171009 574 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm28688-201ENSMUST00000187301 268 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm44300-201ENSMUST00000196792 121 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm20786-201ENSMUST00000212649 436 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AL929285.1-201ENSMUST00000215522 229 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC102352.1-201ENSMUST00000224187 582 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.57□□□□□ -1.52
Ubfd1Q78JW9 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms