Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps54Q5SPW0 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps54Q5SPW0 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm23274-201ENSMUST00000104056 130 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm12131-201ENSMUST00000117479 359 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm11550-201ENSMUST00000118210 699 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm14985-201ENSMUST00000118693 786 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm15791-201ENSMUST00000120365 319 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm12808-201ENSMUST00000120597 404 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm15388-201ENSMUST00000121578 726 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm25389-201ENSMUST00000157340 286 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm23993-201ENSMUST00000157478 144 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm24175-201ENSMUST00000158931 129 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm19124-201ENSMUST00000191041 832 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm4410-201ENSMUST00000199349 686 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Gm5750-201ENSMUST00000218711 801 ntBASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Vps54Q5SPW0 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm11486-201ENSMUST00000107322 478 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm11894-201ENSMUST00000121579 328 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm4617-201ENSMUST00000178993 331 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm10048-201ENSMUST00000194196 372 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm38360-201ENSMUST00000195130 454 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm9317-201ENSMUST00000197055 862 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm2623-201ENSMUST00000199229 286 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm9038-201ENSMUST00000203400 604 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm19596-201ENSMUST00000203685 739 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm7588-201ENSMUST00000216866 571 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm18899-201ENSMUST00000217663 546 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm7676-201ENSMUST00000084055 319 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.23□□□□□ -1.41
Vps54Q5SPW0 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm25418-201ENSMUST00000104214 129 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm24789-201ENSMUST00000104282 131 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm13333-201ENSMUST00000119424 781 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 H3f3c-201ENSMUST00000119459 411 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm4914-201ENSMUST00000119757 459 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm12005-201ENSMUST00000121451 379 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.22□□□□□ -1.41
Vps54Q5SPW0 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms