Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm22032-201ENSMUST00000116946 116 ntBASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm14975-201ENSMUST00000118741 664 ntBASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm15529-201ENSMUST00000121833 994 ntBASIC8.3□□□□□ -1.08
Col17a1Q07563 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC8.3□□□□□ -1.08
Col17a1Q07563 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm44043-201ENSMUST00000203426 3253 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm11506-201ENSMUST00000122414 470 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm23872-201ENSMUST00000175432 77 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm13147-202ENSMUST00000177526 1173 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm37716-201ENSMUST00000193553 947 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm37336-202ENSMUST00000193705 468 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm44237-201ENSMUST00000205183 936 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 AC133910.1-201ENSMUST00000228128 624 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm23099-201ENSMUST00000083454 139 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Col17a1Q07563 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col17a1Q07563 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.29□□□□□ -1.08
Col17a1Q07563 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col17a1Q07563 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Mir7669-201ENSMUST00000183442 58 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm37337-201ENSMUST00000192601 993 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm44234-201ENSMUST00000204246 900 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm6009-201ENSMUST00000210848 280 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 AC140930.4-201ENSMUST00000220750 150 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm18618-201ENSMUST00000222211 473 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 CT025552.2-201ENSMUST00000225497 317 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Gm37268-201ENSMUST00000192254 2614 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 AC163032.1-201ENSMUST00000220671 2970 ntBASIC8.28□□□□□ -1.08
Col17a1Q07563 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col17a1Q07563 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col17a1Q07563 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col17a1Q07563 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col17a1Q07563 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col17a1Q07563 Gm45426-201ENSMUST00000209393 3672 ntBASIC8.27□□□□□ -1.08
Col17a1Q07563 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.08
Col17a1Q07563 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Col17a1Q07563 Gm43503-201ENSMUST00000200033 3408 ntBASIC8.27□□□□□ -1.09
Col17a1Q07563 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms