Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm26078-201ENSMUST00000104067 128 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm5073-201ENSMUST00000118222 820 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm12717-201ENSMUST00000118427 983 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm9208-201ENSMUST00000120468 948 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm25348-201ENSMUST00000158961 111 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm19060-201ENSMUST00000201959 421 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm22155-201ENSMUST00000083836 162 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.67□□□□□ -1.5
Tpm1P58771 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tpm1P58771 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tpm1P58771 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm26372-201ENSMUST00000157831 236 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm22655-201ENSMUST00000174949 96 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Gm27688-201ENSMUST00000183634 91 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm37609-201ENSMUST00000191778 678 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm8920-201ENSMUST00000196153 924 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.66□□□□□ -1.5
Tpm1P58771 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tpm1P58771 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Tpm1P58771 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.66□□□□□ -1.5
Tpm1P58771 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tpm1P58771 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Tpm1P58771 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Tpm1P58771 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Tpm1P58771 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm14520-201ENSMUST00000119258 387 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm13367-201ENSMUST00000119955 796 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm26404-201ENSMUST00000158498 109 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm6693-201ENSMUST00000189583 813 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.65□□□□□ -1.5
Tpm1P58771 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm10108-201ENSMUST00000078246 319 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Gm25260-201ENSMUST00000083053 134 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Tpm1P58771 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.65□□□□□ -1.5
Tpm1P58771 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Tpm1P58771 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tpm1P58771 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Tpm1P58771 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Tpm1P58771 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Tpm1P58771 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Tpm1P58771 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Tpm1P58771 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Tpm1P58771 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.65□□□□□ -1.51
Tpm1P58771 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.65□□□□□ -1.51
Tpm1P58771 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.65□□□□□ -1.51
Tpm1P58771 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Tpm1P58771 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Tpm1P58771 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.64□□□□□ -1.51
Tpm1P58771 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms