Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm25876-201ENSMUST00000104329 119 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm16089-201ENSMUST00000117679 336 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm12936-201ENSMUST00000121439 301 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm15141-201ENSMUST00000121860 729 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm14366-201ENSMUST00000121970 730 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm23546-201ENSMUST00000158211 137 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm26173-201ENSMUST00000158416 136 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm26365-201ENSMUST00000179177 94 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm6931-201ENSMUST00000183103 371 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Mir8118-201ENSMUST00000183962 129 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Mir6943-201ENSMUST00000185186 66 ntBASIC6.61□□□□□ -1.35
Sox1P53783 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm28413-201ENSMUST00000189369 291 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm20203-201ENSMUST00000192352 332 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm44990-201ENSMUST00000203922 217 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Gm18838-201ENSMUST00000204855 886 ntBASIC6.61□□□□□ -1.35
Sox1P53783 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.61□□□□□ -1.35
Sox1P53783 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Sox1P53783 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.61□□□□□ -1.35
Sox1P53783 AC168062.2-201ENSMUST00000228907 422 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.61□□□□□ -1.35
Sox1P53783 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.61□□□□□ -1.35
Sox1P53783 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox1P53783 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox1P53783 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox1P53783 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.6□□□□□ -1.35
Sox1P53783 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox1P53783 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm12077-201ENSMUST00000117049 364 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm12492-201ENSMUST00000117665 564 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm12442-201ENSMUST00000118372 338 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm13738-201ENSMUST00000122437 469 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm25487-201ENSMUST00000158725 125 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm23824-201ENSMUST00000158741 276 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox1P53783 Gm9587-201ENSMUST00000172449 454 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm10074-201ENSMUST00000174543 249 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox1P53783 Gm18900-201ENSMUST00000193218 584 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Mir219c-201ENSMUST00000199860 60 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm7890-201ENSMUST00000204877 601 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm45192-201ENSMUST00000206749 283 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.6□□□□□ -1.35
Sox1P53783 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Gm40692-201ENSMUST00000220411 491 ntBASIC6.6□□□□□ -1.35
Sox1P53783 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox1P53783 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms