Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11805-201ENSMUST00000121238 600 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Traf1P39428 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm21803-201ENSMUST00000188897 693 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm28567-201ENSMUST00000190270 693 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm37044-201ENSMUST00000193531 693 ntBASIC6.28□□□□□ -1.4
Traf1P39428 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm38369-201ENSMUST00000195101 693 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm18537-201ENSMUST00000205709 989 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Gm18871-201ENSMUST00000218655 745 ntBASIC6.28□□□□□ -1.4
Traf1P39428 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.28□□□□□ -1.4
Traf1P39428 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.28□□□□□ -1.4
Traf1P39428 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Gm10145-201ENSMUST00000077776 462 ntBASIC6.28□□□□□ -1.4
Traf1P39428 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.28□□□□□ -1.4
Traf1P39428 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.28□□□□□ -1.4
Traf1P39428 AW046200-203ENSMUST00000211787 2479 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.27□□□□□ -1.4
Traf1P39428 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Traf1P39428 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Traf1P39428 Gm9427-201ENSMUST00000116187 651 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm14874-201ENSMUST00000118995 438 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm13363-201ENSMUST00000122008 522 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm23211-201ENSMUST00000122717 308 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm3757-201ENSMUST00000125878 675 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm10319-202ENSMUST00000159439 846 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Traf1P39428 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Mir6374-201ENSMUST00000184003 107 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29596-201ENSMUST00000185710 385 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28604-201ENSMUST00000186629 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28566-201ENSMUST00000186714 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28683-201ENSMUST00000187134 615 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28194-201ENSMUST00000187412 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28886-202ENSMUST00000187889 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms