Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm36986-201ENSMUST00000195320 353 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm45722-201ENSMUST00000213075 466 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm5045-201ENSMUST00000027054 810 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm5215-201ENSMUST00000054380 405 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col2a1P28481 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col2a1P28481 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm24117-201ENSMUST00000103973 133 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Gm24628-201ENSMUST00000122761 289 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm22726-201ENSMUST00000158089 179 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm27818-201ENSMUST00000184536 159 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Gm18802-201ENSMUST00000186270 888 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Gm5511-201ENSMUST00000189380 802 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm3816-201ENSMUST00000209803 433 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.87□□□□□ -1.47
Col2a1P28481 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.87□□□□□ -1.47
Col2a1P28481 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col2a1P28481 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col2a1P28481 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.87□□□□□ -1.47
Col2a1P28481 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.86□□□□□ -1.47
Col2a1P28481 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col2a1P28481 Gm13172-201ENSMUST00000118685 256 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm3362-201ENSMUST00000148102 466 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm17081-201ENSMUST00000167363 478 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm19617-201ENSMUST00000202977 308 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm8719-201ENSMUST00000203602 534 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.86□□□□□ -1.47
Col2a1P28481 Gm8264-201ENSMUST00000217801 465 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm8158-201ENSMUST00000219220 465 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm8112-201ENSMUST00000219637 465 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col2a1P28481 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col2a1P28481 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.86□□□□□ -1.47
Col2a1P28481 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col2a1P28481 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Col2a1P28481 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col2a1P28481 Gm11196-201ENSMUST00000119052 395 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.85□□□□□ -1.47
Col2a1P28481 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col2a1P28481 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 Gm34224-201ENSMUST00000204606 364 ntBASIC5.85□□□□□ -1.47
Col2a1P28481 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.85□□□□□ -1.47
Col2a1P28481 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col2a1P28481 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms