Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm22158-201ENSMUST00000158411 126 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm3091-201ENSMUST00000163408 484 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm3170-201ENSMUST00000168753 850 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm3348-201ENSMUST00000177813 850 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Sdc1P18828 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm37614-201ENSMUST00000195645 210 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm20128-201ENSMUST00000196189 417 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm44485-201ENSMUST00000199569 137 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm45171-201ENSMUST00000206360 736 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC165292.1-201ENSMUST00000215218 620 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 AC122290.1-201ENSMUST00000225631 1078 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 AC137902.1-201ENSMUST00000228184 102 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sdc1P18828 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Sdc1P18828 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Gm14976-201ENSMUST00000117055 1394 ntBASIC4.22□□□□□ -1.73
Sdc1P18828 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.22□□□□□ -1.73
Sdc1P18828 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sdc1P18828 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sdc1P18828 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sdc1P18828 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sdc1P18828 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.73
Sdc1P18828 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sdc1P18828 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sdc1P18828 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sdc1P18828 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.21□□□□□ -1.73
Sdc1P18828 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
Sdc1P18828 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm24434-201ENSMUST00000104081 132 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm25795-201ENSMUST00000104421 132 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm12643-201ENSMUST00000116078 374 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm12039-201ENSMUST00000118219 180 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm11584-201ENSMUST00000120636 325 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm16139-201ENSMUST00000160015 420 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm27044-201ENSMUST00000183033 796 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC4.21□□□□□ -1.74
Sdc1P18828 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm2325-201ENSMUST00000186637 581 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.21□□□□□ -1.74
Sdc1P18828 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC4.21□□□□□ -1.74
Sdc1P18828 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm44432-201ENSMUST00000203342 938 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm44221-201ENSMUST00000203552 388 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Gm44251-201ENSMUST00000204963 442 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm46311-201ENSMUST00000217971 203 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Sdc1P18828 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Gm22456-201ENSMUST00000082578 125 ntBASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sdc1P18828 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sdc1P18828 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms