Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm13532-201ENSMUST00000120373 240 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm12399-201ENSMUST00000121475 446 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm24065-201ENSMUST00000157487 264 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm22724-201ENSMUST00000158091 127 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm25861-201ENSMUST00000158251 109 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm24860-201ENSMUST00000158457 276 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm7281-201ENSMUST00000160010 543 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdx1P18111 Mir6992-201ENSMUST00000183342 109 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm17934-201ENSMUST00000192818 422 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm37784-201ENSMUST00000193233 189 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Trav3n-2-201ENSMUST00000197693 334 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdx1P18111 Trav3d-2-201ENSMUST00000199874 334 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm7890-201ENSMUST00000204877 601 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 AC129537.1-201ENSMUST00000226596 1228 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdx1P18111 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Cdx1P18111 Gm22300-201ENSMUST00000082661 126 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm12077-201ENSMUST00000117049 364 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm11270-201ENSMUST00000117685 471 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm14098-201ENSMUST00000119295 623 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm13902-201ENSMUST00000120168 605 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdx1P18111 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm24767-201ENSMUST00000158509 95 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx1P18111 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm17198-201ENSMUST00000171792 1154 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm19427-201ENSMUST00000183619 208 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm18177-201ENSMUST00000188373 404 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm37265-201ENSMUST00000191698 885 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm38040-201ENSMUST00000193505 225 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm17952-201ENSMUST00000193914 747 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm37758-201ENSMUST00000194275 629 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm5306-201ENSMUST00000203325 757 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Gm9038-201ENSMUST00000203400 604 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC4.41□□□□□ -1.7
Cdx1P18111 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm45710-201ENSMUST00000212847 215 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdx1P18111 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdx1P18111 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Gm10062-201ENSMUST00000072180 1470 ntBASIC4.41□□□□□ -1.7
Cdx1P18111 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Cdx1P18111 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx1P18111 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.4□□□□□ -1.7
Cdx1P18111 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Cdx1P18111 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.4□□□□□ -1.7
Cdx1P18111 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdx1P18111 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdx1P18111 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdx1P18111 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdx1P18111 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms