Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm7822-201ENSMUST00000222433 581 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm2645-201ENSMUST00000223516 547 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm5215-201ENSMUST00000054380 405 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col1a1P11087 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col1a1P11087 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Gm5558-201ENSMUST00000178933 495 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Gm44412-201ENSMUST00000203018 294 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.06□□□□□ -1.44
Col1a1P11087 Gm32526-201ENSMUST00000221878 981 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Nsa2-203ENSMUST00000225410 974 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Mir346-201ENSMUST00000083547 98 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col1a1P11087 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col1a1P11087 Gm37916-201ENSMUST00000192153 2435 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.06□□□□□ -1.44
Col1a1P11087 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Col1a1P11087 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm23193-201ENSMUST00000102427 82 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm13733-201ENSMUST00000117290 535 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm15390-201ENSMUST00000120323 738 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm13000-201ENSMUST00000120937 496 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm12807-201ENSMUST00000121546 962 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm24444-201ENSMUST00000157244 308 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm26085-201ENSMUST00000157900 116 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm25942-201ENSMUST00000180080 110 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm19617-201ENSMUST00000202977 308 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm44214-201ENSMUST00000204153 606 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Gm8942-201ENSMUST00000217892 400 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col1a1P11087 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.05□□□□□ -1.44
Col1a1P11087 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col1a1P11087 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col1a1P11087 Gm43784-201ENSMUST00000202922 2436 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm5383-201ENSMUST00000121177 617 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm12413-201ENSMUST00000121508 312 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm27611-201ENSMUST00000184690 108 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm18382-201ENSMUST00000194394 582 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm4602-201ENSMUST00000203198 308 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm45628-201ENSMUST00000210849 274 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms