Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm2654-201ENSMUST00000221381 1592 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Mir883a-201ENSMUST00000104824 76 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm14891-201ENSMUST00000117378 596 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm14529-201ENSMUST00000117894 406 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm14750-201ENSMUST00000118262 516 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm11972-201ENSMUST00000118514 389 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm13510-201ENSMUST00000118659 429 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm24442-201ENSMUST00000157238 327 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm22882-201ENSMUST00000157749 124 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm22765-201ENSMUST00000158371 128 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm3141-201ENSMUST00000168726 499 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm22702-201ENSMUST00000175372 69 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm19815-201ENSMUST00000175818 335 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm21399-201ENSMUST00000180210 597 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm8941-201ENSMUST00000181451 899 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm27037-201ENSMUST00000182270 960 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Mir8094-201ENSMUST00000183361 117 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm29086-201ENSMUST00000186774 222 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm29085-201ENSMUST00000187108 225 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm29038-201ENSMUST00000191543 678 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm17956-201ENSMUST00000199931 838 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm44779-201ENSMUST00000206937 708 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm18562-201ENSMUST00000209949 915 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm6581-201ENSMUST00000214545 260 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm19217-201ENSMUST00000218238 328 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Clec2j-201ENSMUST00000032517 515 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Snord68-201ENSMUST00000082516 86 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm25189-201ENSMUST00000083911 164 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm8995-202ENSMUST00000208417 3490 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm43537-201ENSMUST00000199064 3110 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Hoxd3P09027 CT010514.1-201ENSMUST00000214088 2969 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxd3P09027 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm43873-201ENSMUST00000204505 3938 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm19028-201ENSMUST00000189614 1873 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm23691-201ENSMUST00000101878 107 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms