Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm7398-201ENSMUST00000178589 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7391-201ENSMUST00000178680 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7375-201ENSMUST00000179232 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm3681-201ENSMUST00000179940 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Mir7033-201ENSMUST00000184259 81 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm27919-201ENSMUST00000185163 107 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7867-201ENSMUST00000189856 546 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm32158-201ENSMUST00000200135 404 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7452-201ENSMUST00000200764 788 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm44147-201ENSMUST00000204658 94 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm44857-201ENSMUST00000208331 196 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm44892-201ENSMUST00000208595 488 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm2754-201ENSMUST00000223383 589 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm11984-201ENSMUST00000118142 766 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm13455-201ENSMUST00000118767 517 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm16511-201ENSMUST00000120019 564 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm13735-201ENSMUST00000120217 670 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm4992-201ENSMUST00000120256 768 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm7700-201ENSMUST00000120273 970 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm13489-201ENSMUST00000121234 971 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm20462-201ENSMUST00000172623 408 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm23162-201ENSMUST00000175081 121 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm24157-201ENSMUST00000175265 111 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm25525-201ENSMUST00000177701 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm26178-201ENSMUST00000177706 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm26465-201ENSMUST00000178517 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm24317-201ENSMUST00000178536 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm25021-201ENSMUST00000179184 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm22995-201ENSMUST00000179670 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm24424-201ENSMUST00000179714 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm24389-201ENSMUST00000179962 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm25672-201ENSMUST00000180111 107 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Mir6411-201ENSMUST00000183556 108 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm28343-201ENSMUST00000185386 112 ntBASIC5.65□□□□□ -1.5
Pcdh1F7BJK1 Gm18447-201ENSMUST00000187501 307 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms