Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14560-201ENSMUST00000118672 375 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm12813-201ENSMUST00000119615 902 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm10087-201ENSMUST00000167650 330 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm43418-201ENSMUST00000201334 428 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm45722-201ENSMUST00000213075 466 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm9512-201ENSMUST00000223112 497 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm5045-201ENSMUST00000027054 810 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Scn3aA2ASI5 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.71□□□□□ -1.49
Scn3aA2ASI5 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Scn3aA2ASI5 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scn3aA2ASI5 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Scn3aA2ASI5 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm22899-201ENSMUST00000104540 131 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm11910-201ENSMUST00000121624 432 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm28769-201ENSMUST00000190176 615 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm42720-201ENSMUST00000196813 300 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn3aA2ASI5 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm14831-201ENSMUST00000120253 409 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm8214-201ENSMUST00000172123 351 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm32453-201ENSMUST00000204183 456 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm15297-201ENSMUST00000117795 290 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm13149-201ENSMUST00000122071 339 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm12317-201ENSMUST00000122307 319 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm29332-201ENSMUST00000190829 227 ntBASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn3aA2ASI5 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms