Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb2S4R1M3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Gm4968-201ENSMUST00000071458 858 ntBASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb2S4R1M3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
H2afb2S4R1M3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2afb2S4R1M3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb2S4R1M3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb2S4R1M3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Dio3-201ENSMUST00000097228 1449 ntBASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
H2afb2S4R1M3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb2S4R1M3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms