Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl40Q9Z2Q5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm6576-201ENSMUST00000169678 883 ntBASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl40Q9Z2Q5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl40Q9Z2Q5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl40Q9Z2Q5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.71■□□□□ 0.42
Mrpl40Q9Z2Q5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl40Q9Z2Q5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl40Q9Z2Q5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl40Q9Z2Q5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms