Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atp6v1c1Q9Z1G3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Atp6v1c1Q9Z1G3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atp6v1c1Q9Z1G3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atp6v1c1Q9Z1G3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atp6v1c1Q9Z1G3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.37■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp6v1c1Q9Z1G3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp6v1c1Q9Z1G3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp6v1c1Q9Z1G3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms