Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h3Q9Z0Y9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.27■□□□□ 0.68
Nr1h3Q9Z0Y9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr1h3Q9Z0Y9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h3Q9Z0Y9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.25■□□□□ 0.67
Nr1h3Q9Z0Y9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h3Q9Z0Y9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h3Q9Z0Y9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm7889-201ENSMUST00000185591 958 ntBASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nr1h3Q9Z0Y9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h3Q9Z0Y9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nr1h3Q9Z0Y9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms