Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Cldn3Q9Z0G9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn3Q9Z0G9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn3Q9Z0G9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cldn3Q9Z0G9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn3Q9Z0G9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn3Q9Z0G9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn3Q9Z0G9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn3Q9Z0G9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms