Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
ClcnkaQ9WUB7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClcnkaQ9WUB7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClcnkaQ9WUB7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Flg-201ENSMUST00000050758 1488 ntBASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClcnkaQ9WUB7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Gm12441-201ENSMUST00000121806 588 ntBASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClcnkaQ9WUB7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClcnkaQ9WUB7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms