Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn2Q9R0A1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clcn2Q9R0A1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn2Q9R0A1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clcn2Q9R0A1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn2Q9R0A1 Gm12441-201ENSMUST00000121806 588 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms