Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom3Q9QXN0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.8■□□□□ 0.44
Shroom3Q9QXN0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom3Q9QXN0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shroom3Q9QXN0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Gm12382-201ENSMUST00000122005 922 ntBASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shroom3Q9QXN0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 Gm9987-201ENSMUST00000069768 567 ntBASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shroom3Q9QXN0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Gm15375-201ENSMUST00000119510 849 ntBASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms