Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.08■□□□□ 0.49
Msh5Q9QUM7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh5Q9QUM7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.08■□□□□ 0.49
Msh5Q9QUM7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Msh5Q9QUM7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Gm22325-201ENSMUST00000158904 308 ntBASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.08■□□□□ 0.48
Msh5Q9QUM7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh5Q9QUM7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.07■□□□□ 0.48
Msh5Q9QUM7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.07■□□□□ 0.48
Msh5Q9QUM7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Gm6546-201ENSMUST00000192096 766 ntBASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh5Q9QUM7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Gm6211-202ENSMUST00000167849 925 ntBASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh5Q9QUM7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.04■□□□□ 0.48
Msh5Q9QUM7 Gm37720-201ENSMUST00000195497 1241 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms