Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tdp2Q9JJX7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tdp2Q9JJX7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tdp2Q9JJX7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tdp2Q9JJX7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tdp2Q9JJX7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.46■□□□□ 0.38
Tdp2Q9JJX7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tdp2Q9JJX7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Tdp2Q9JJX7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.45■□□□□ 0.38
Tdp2Q9JJX7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms