Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpf2Q9JJ80 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Rpf2Q9JJ80 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpf2Q9JJ80 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.88■□□□□ 0.61
Rpf2Q9JJ80 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpf2Q9JJ80 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Gm10493-201ENSMUST00000097270 612 ntBASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpf2Q9JJ80 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpf2Q9JJ80 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Gm7514-201ENSMUST00000209475 934 ntBASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpf2Q9JJ80 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms