Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OtofQ9ESF1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
OtofQ9ESF1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
OtofQ9ESF1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OtofQ9ESF1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.67■□□□□ 0.42
OtofQ9ESF1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OtofQ9ESF1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Gm10013-201ENSMUST00000106074 672 ntBASIC17.66■□□□□ 0.42
OtofQ9ESF1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OtofQ9ESF1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.66■□□□□ 0.42
OtofQ9ESF1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.66■□□□□ 0.42
OtofQ9ESF1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OtofQ9ESF1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Gm37025-201ENSMUST00000195159 829 ntBASIC17.65■□□□□ 0.42
OtofQ9ESF1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OtofQ9ESF1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.64■□□□□ 0.41
OtofQ9ESF1 Gm10819-201ENSMUST00000099988 561 ntBASIC17.64■□□□□ 0.41
OtofQ9ESF1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OtofQ9ESF1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.63■□□□□ 0.41
OtofQ9ESF1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.63■□□□□ 0.41
OtofQ9ESF1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OtofQ9ESF1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Gm7638-201ENSMUST00000121348 967 ntBASIC17.62■□□□□ 0.41
OtofQ9ESF1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.62■□□□□ 0.41
OtofQ9ESF1 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.62■□□□□ 0.41
OtofQ9ESF1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OtofQ9ESF1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms