Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1cQ9ES64 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1cQ9ES64 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1cQ9ES64 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1cQ9ES64 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1cQ9ES64 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Gm43017-201ENSMUST00000198296 752 ntBASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1cQ9ES64 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Gm12251-201ENSMUST00000117893 792 ntBASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Gm7860-201ENSMUST00000121190 879 ntBASIC20.3■□□□□ 0.84
Ush1cQ9ES64 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Spcs1-204ENSMUST00000226782 949 ntBASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1cQ9ES64 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ush1cQ9ES64 Dancr-204ENSMUST00000132389 2347 ntBASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ush1cQ9ES64 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Gm43173-201ENSMUST00000202246 593 ntBASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1cQ9ES64 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms